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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs62341880 chr4:173881117 C/G GALNTL6 chr4:172733405-173962710:+ 0.51 11.89 9.85E-29 Box Plot
THCA rs62347609 chr5:18458977 G/A GNB4 chr3:179113877-179169378:- 0.48 5.94 5.6E-9 Box Plot
THCA rs62350908 chr5:18415451 C/A GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62350909 chr5:18416098 T/C GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62350910 chr5:18416173 C/T GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62350928 chr5:18420915 A/T GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62350949 chr5:18425641 A/G GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62350950 chr5:18430990 C/T GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62350951 chr5:18431153 C/T GNB4 chr3:179113877-179169378:- 0.48 5.9 6.83E-9 Box Plot
THCA rs62350956 chr5:18434954 G/A GNB4 chr3:179113877-179169378:- 0.52 6.57 1.34E-10 Box Plot
THCA rs62353097 chr5:18438275 C/T GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62353101 chr5:18438635 T/C GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62353102 chr5:18438962 G/C GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62353107 chr5:18439754 A/T GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs62365309 chr5:49864736 C/T LOC647121 chr1:121260910-121313686:+ -0.36 -7.42 5.3E-13 Box Plot